Genomics support in Indonesia

Find the right sequencing service for your research.

GSN helps universities, research institutes, hospitals, and companies choose a suitable workflow, prepare samples, arrange shipment, and define the data or analysis they need.

ResearchSequencing and bioinformaticsWGS, RNA-seq, microbiome, long reads, single cell, and moreClinicalGenetic diagnosticsPrevention, rare disease, prenatal, tumor, and genetic counselling
Molecular model of a DNA double helix

How a project moves

SampleQCSequenceData
Quick start

What do you need to learn from the sample?

Bioinformatics

See what each analysis level includes.

Select a workflow and analysis level. Higher levels include the deliverables from the lower levels unless stated otherwise.

Selected workflow

Short-Read WGS

5analysis levels

Human analysis can use hg19 or GRCh38. Higher levels include the outputs from lower levels.

01
Included at Level 1

Processed reads & QC

✓

Demultiplexed and adapter-trimmed FASTQ

✓

Metrics in CSV format

✓

MultiQC report in HTML

Exact references, databases, and formats are confirmed per project.

Research services

Browse the full sequencing and analysis portfolio.

Search by method, sample, or research goal. Open a service page for its usual applications, input material, and available outputs.

01

DNA & Genome

Whole Genome Sequencing

Whole genome sequencing service with short-read and HiFi long-read pathways for variant discovery, comparative genomics, and de novo assembly.

Variant discoveryDe novo assemblyPopulation studies
Explore Whole Genome Sequencing
02

DNA & Genome

Exome & Targeted Sequencing

Whole exome and targeted sequencing service for protein-coding regions, selected genes, and custom genomic targets.

Rare variantsCohort studiesCustom gene panels
Explore Exome & Targeted Sequencing
03

RNA & Transcriptome

Transcriptome Sequencing

RNA sequencing (RNA-seq) service for coding or whole-transcriptome profiling, isoform discovery, and differential analysis.

Gene expressionDifferential analysisFusion discovery
Explore Transcriptome Sequencing
04

RNA & Transcriptome

Single-Cell & Spatial RNA

Single-cell RNA sequencing service to resolve cellular heterogeneity and connect expression patterns with tissue morphology.

Cell populationsTumor heterogeneityTissue architecture
Explore Single-Cell & Spatial RNA
05

Microbiome

Microbiome Analysis

Metagenomic sequencing service with shotgun metagenomics or full-length 16S rRNA profiling for community insight.

TaxonomyFunctional profilingEnvironmental studies
Explore Microbiome Analysis
06

Oncology & Immunology

Translational Oncology

Research-use tumor profiling NGS service with focused, comprehensive, and liquid-biopsy approaches.

Tumor profilingBiomarker researchTherapy-response studies
Explore Translational Oncology
07

Oncology & Immunology

Immune Profiling

Immune profiling service with HLA typing, T-cell receptor sequencing, and single-cell analysis for immunology projects.

HLA typingTCR repertoireImmune-cell profiling
Explore Immune Profiling
08

Sanger & Oligo

Sanger Sequencing & Oligos

Sanger DNA sequencing service for sequence confirmation, plasmids, PCR products, and custom primers by tube or plate.

Amplicon confirmationPlasmid checksPrimer synthesis
Explore Sanger Sequencing & Oligos
09

RNA & Transcriptome

Small RNA Sequencing

miRNA and small RNA sequencing service for short regulatory transcripts, biomarkers, and expression research.

miRNABiomarkersRegulatory RNA
Explore Small RNA Sequencing
10

Epigenomics

Methylation Sequencing

DNA methylation sequencing service with genome-wide or long-read approaches for epigenomic research.

5mC profilingBiomarker studiesCell differentiation
Explore Methylation Sequencing
11

DNA & Genome

Ready-to-Load Libraries

Sequencing-only service for compatible customer-prepared libraries using high-capacity short-read or long-read sequencing.

Custom librariesFlexible outputSequencing capacity
Explore Ready-to-Load Libraries
12

Data & Bioinformatics

Bioinformatics & Data Analysis

NGS bioinformatics analysis services that turn raw reads into interpretable outputs with project-matched pipelines.

VariantsExpressionAssembly & microbiome
Explore Bioinformatics & Data Analysis

Sample preparation

Check the basics before shipping a sample.

These are practical planning values adapted to the available service workflows. Always wait for project-specific confirmation before shipment.

01

Typical planning values

Genomic DNA for short-read sequencing

Total amount≥600 ng
Concentration≥20 ng/µl
Volume / format≥30 µl
Quality
High-molecular-weight DNA preferred; RNase-treated
Recommended QC
Use fluorometric quantification. Provide purity and fragment-size information when available.
Shipping
Ship chilled at approximately 4 °C or frozen, following the confirmed shipment plan.
Important: lower input, degraded material, FFPE, unusual matrices, and custom buffers require individual feasibility review.

Technology guide

Choose the read strategy from the biological question.

The required output, sample quality, genome complexity, and study design determine whether short reads, long reads, or Sanger sequencing are suitable.

01 / SHORT READ

High-throughput precision

Well suited to variant discovery, gene-expression quantification, microbiome profiling, and projects needing scalable data output.

  • Typical reads: paired-end
  • Strength: depth and throughput
  • Best for: quantification and small variants
03 / SANGER

Focused sequence confirmation

A direct route for PCR products, plasmids, clone checks, and targeted confirmation using one or more sequencing primers.

  • Typical reads: single targeted trace
  • Strength: simple targeted review
  • Best for: amplicons and plasmids

Project workflow

What happens after you contact GSN.

Choose a stage to see what we review and what information is needed next.

01

Selected stage

Project consultation

We translate your research objective into a practical sequencing plan, then confirm sample count, organism, output, analysis scope, budget assumptions, and timeline.

What we confirm

Scientific objective and comparison groups

Organism or clinical context

Sample count and available material

Required output and analysis

Prepare your project brief

Working with GSN

One contact for the scientific and practical parts of the project.

GSN coordinates project design, sample preparation, shipment, quotation, and communication for teams in Indonesia.

01

Scientific project guidance

Discuss organism, design, coverage, output, controls, and analysis before committing budget or sending samples.

02

Sample & shipment coordination

Review sample readiness, documentation, packaging, and the correct shipment pathway before dispatch.

03

Clear administration

Receive an official local quotation and invoice, including tax-document support where applicable.

04

Structured project handover

Keep sample IDs, requirements, data scope, contacts, and delivery expectations traceable from enquiry to result.

Transparency by project

GSN coordinates consultation, local administration, and project communication. The performing laboratory, test configuration, applicable quality framework, sample acceptance criteria, and turnaround time are stated in the official quotation.

Ask what applies to your project

Common questions

What researchers usually ask first.

For a project-specific answer, send a short brief with the sample type, sample count, objective, and timeline.

Email scientific support
Do I need to know the exact platform or output?+

No. Start with the research objective, organism, sample type, sample count, and expected result. Platform, read type, and output can then be matched to the question.

Which DNA and NGS sequencing services are available in Indonesia?+

GSN coordinates research workflows for whole genome and exome sequencing, RNA-seq, single-cell RNA sequencing, metagenomics and 16S rRNA, Sanger sequencing, long-read sequencing, methylation sequencing, tumor and immune profiling, plus NGS bioinformatics analysis. The final configuration is matched to the sample, study design, and intended output.

How much does an NGS sequencing project cost?+

Cost depends on the sequencing method, sample count, genome size, target output or coverage, library-preparation requirements, and bioinformatics scope. Send a project brief to receive a clearly defined configuration and quotation.

Can I request a quotation for a grant or proposal?+

Yes. Include the proposal deadline, estimated sample count, preferred scope, and whether bioinformatics is required. Assumptions will be stated clearly in the quotation.

Can GSN help with DNA/RNA extraction and QC?+

Extraction and QC coordination can be discussed for different sample types. Available measurements may include fluorometric quantification, electrophoresis, and fragment-integrity assessment, subject to the agreed workflow.

What happens if a sample does not pass incoming QC?+

The issue and available options are reviewed before continuing. Depending on the workflow, options may include re-extraction, replacement, an adapted protocol, or proceeding with an acknowledged risk.

Can I order Sanger sequencing or custom primers separately?+

Yes. Tube and 96-well submissions can be prepared for Sanger sequencing, while custom primer or oligo orders can specify sequence, scale, purification, modification, and format.

How will data be delivered?+

The quotation defines deliverables. These may range from raw FASTQ files and QC reports to alignment files, variants, count matrices, assemblies, taxonomy tables, or structured analysis reports.

Project enquiry

Send the information you already have.

You do not need to know the platform or output yet. The objective, sample type, sample count, organism, and timeline are enough to begin.

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